STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO1418Hypothetical protein. (268 aa)    
Predicted Functional Partners:
PTO1419
Replication factor-A protein 1.
 
  
 0.988
PTO1421
NMD protein affecting ribosome stability and mRNA decay.
 
     0.848
PTO1420
Hypothetical protein.
       0.788
PTO0951
Thiosulfate sulfurtransferase.
 
     0.703
PTO0703
Hypothetical ribosomal protein.
  
     0.684
PTO0700
Hypothetical phosphoserine phosphatase.
 
     0.680
PTO0265
Molybdenum cofactor biosynthesis protein A.
 
     0.674
PTO0724
Archaeosine tRNA-ribosyltransferase.
  
     0.658
PTO1417
Homoserine dehydrogenase.
       0.651
PTO0746
Conserved hypothetical membrane protein.
  
     0.645
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.