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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO1448Oligopeptide ABC transporter Opp2, permease protein. (328 aa)    
Predicted Functional Partners:
PTO1449
Oligopeptide ABC transporter Opp2, permease protein.
  
 0.983
PTO1450
Oligopeptide ABC transporter Opp2, ATP binding protein.
 
 0.983
PTO0216
Dipeptide ABC transporter Dpp1, permease protein.
  
 0.977
PTO1451
Oligopeptide ABC transporter Opp2, ATP binding protein.
  
 0.977
PTO1447
Oligopeptide ABC transporter Opp2, extracellular binding protein.
 
 
 0.971
PTO0215
Dipeptide ABC transporter Dpp1, ATP binding protein.
 
 0.943
PTO0682
Oligopeptide ABC transporter Opp1, permease protein.
 
  
 0.863
PTO0683
Oligopeptide ABC transporter Opp1, ATP binding protein.
  
 0.828
PTO0214
Dipeptide ABC transporter Dpp1, ATP binding protein.
  
 0.824
PTO0765
Oligopeptide ABC transporter Dpp1, ATP binding protein.
 
 0.767
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.