STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO1491Acetyltransferase. (151 aa)    
Predicted Functional Partners:
PTO1492
Glucoamylase.
       0.773
PTO1493
Sugar ABC transporter ATP binding protein.
  
    0.625
rpl23
Large subunit ribosomal protein L23P; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family.
   
   0.621
PTO1494
Sugar ABC transporter fusion protein.
       0.613
PTO1495
Sugar ABC transporter extracellular solute binding protein.
       0.556
rpl18
Large subunit ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
   
   0.442
PTO0555
RNase L inhibitor homolog, predicted ATPase.
   
    0.440
rpl32e
Large subunit ribosomal protein L32E; Belongs to the eukaryotic ribosomal protein eL32 family.
    
   0.424
rpl3
Large subunit ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
   
   0.420
rpl29
Large subunit ribosomal protein S29P; Belongs to the universal ribosomal protein uL29 family.
    
 
 0.408
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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