STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO15043-hydroxybutyryl-CoA dehydrogenase. (273 aa)    
Predicted Functional Partners:
PTO1505
acetyl-CoA acetyltransferase.
 
 0.998
PTO0383
Beta-ketoacyl synthase; Thiolase.
  
 0.986
PTO1188
Beta-ketoacyl synthase; Thiolase.
  
 0.984
PTO0954
enoyl-CoA hydratase/isomerase family.
 
 0.977
PTO1023
3-ketoacyl-CoA thiolase.
 
 
 0.977
PTO1175
acetoacetyl-CoA synthetase.
  
 
 0.937
PTO1021
3-hydroxybutyryl-CoA dehydrogenase/3-hydroxybutyryl-CoA dehydratase.
 
  
 
0.908
PTO0384
3-hydroxy-3-methylglutaryl-CoA-synthase/3- oxoacyl-[acyl-carrier-protein] synthase III; Belongs to the thiolase-like superfamily. UPF0219 family.
    
 0.900
PTO1506
Conserved hypothetical protein.
     
 0.763
PTO1396
acyl-CoA dehydrogenase, short-chain specific.
 
 
 0.690
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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