STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO1523Transcriptional regulator. (339 aa)    
Predicted Functional Partners:
rps3ae
Small subunit ribosomal protein S3AE; Belongs to the eukaryotic ribosomal protein eS1 family.
 
     0.667
PTO1522
Alkyl hydroperoxide reductase subunit c.
       0.613
PTO0685
Oligopeptide ABC transporter Opp1, extracellular binding protein.
  
     0.558
PTO0018
Extracellular solute-binding protein.
  
     0.554
PTO0180
Extracellular solute-binding protein.
  
     0.525
PTO0478
Diphosphomevalonate decarboxylase; Catalyzes the ATP-independent decarboxylation of (R)- mevalonate 3,5-bisphosphate to isopentenyl phosphate. Functions in an alternative mevalonate pathway, only present in extreme acidophiles of the Thermoplasmatales order, which passes through mevalonate 3- phosphate rather than mevalonate 5-phosphate. Shows no detectable decarboxylase activity on mevalonate, mevalonate 3-phosphate, mevalonate 5-phosphate or mevalonate 5-pyrophosphate.
  
     0.481
PTO0674
Transporter.
  
     0.470
PTO0945
Hypothetical protein; Contains acetyltransferase domain.
  
     0.468
PTO0434
Hypothetical transmembrane protein DUF 373.
  
     0.432
cdc6
Origin recognition complex subunit; Involved in regulation of DNA replication.
  
     0.432
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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