Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PTO1535Phytoene synthase. (283 aa)    
Predicted Functional Partners:
PTO1532
Phytoene dehydrogenase.
 
 0.999
PTO1534
Lycopene cyclase.
 
   
 0.956
PTO0848
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 0.928
PTO1199
Octaprenyl-diphosphate synthase; Farnesyl pyrophosphate synthetase/ geranyltransferase/farnesyltransferase/hexaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.914
gap
Glyceraldehyde 3-phosphate dehydrogenase.
  
  
 0.866
tbp
TATA-box binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.
   
    0.833
PTO1531
Beta carotene hydroxylase.
 
   
 0.824
PTO1533
Glycosyl transferase.
  
  
 0.816
uppS
Undecaprenyl pyrophosphate synthetase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids.
   
 
 0.810
rps14
Small subunit ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles.
  
 
  0.793
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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