STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001646785_01130Unannotated protein. (169 aa)    
Predicted Functional Partners:
GCA_001646785_03943
Unannotated protein.
  
 
 0.691
GCA_001646785_05925
Unannotated protein.
 
  
  0.681
GCA_001646785_04063
Unannotated protein.
   
 
 0.589
GCA_001646785_01131
Unannotated protein.
       0.482
GCA_001646785_03193
Unannotated protein.
  
 
 0.457
GCA_001646785_03070
Unannotated protein.
    
  0.452
GCA_001646785_05926
Unannotated protein.
  
  
 0.452
GCA_001646785_01517
Unannotated protein.
    
 0.429
GCA_001646785_00798
Unannotated protein.
  
 
 0.424
GCA_001646785_03194
Unannotated protein.
  
 
 0.417
Your Current Organism:
Rhodococcus phenolicus
NCBI taxonomy Id: 263849
Other names: DSM 44812, JCM 14914, NRRL B-24323, R. phenolicus, Rhodococcus phenolicus Rehfuss and Urban 2006, strain G2P
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.