STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001646785_05483Unannotated protein. (534 aa)    
Predicted Functional Partners:
GCA_001646785_05484
Unannotated protein.
 
 
 0.985
GCA_001646785_05481
Unannotated protein.
 
 
 0.956
GCA_001646785_02820
Unannotated protein.
 
 
 0.928
GCA_001646785_01462
Unannotated protein.
 
 
 0.924
GCA_001646785_02367
Unannotated protein.
 
 
 0.914
GCA_001646785_02818
Unannotated protein.
 
 
 0.908
GCA_001646785_02102
Unannotated protein.
 
  
  0.898
GCA_001646785_04328
Unannotated protein.
 
 
 0.898
GCA_001646785_01461
Unannotated protein.
 
 
 0.885
GCA_001646785_04311
Unannotated protein.
 
 
 0.863
Your Current Organism:
Rhodococcus phenolicus
NCBI taxonomy Id: 263849
Other names: DSM 44812, JCM 14914, NRRL B-24323, R. phenolicus, Rhodococcus phenolicus Rehfuss and Urban 2006, strain G2P
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.