STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ36844.1Lysozyme-like. (203 aa)    
Predicted Functional Partners:
SJZ77725.1
Phage replication initiation protein.
  
    0.735
SJZ77870.1
AAA-like domain-containing protein.
 
  
 0.729
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
      0.709
SJZ77678.1
Hypothetical protein.
 
  
 0.646
SJZ36403.1
Uncharacterized membrane protein YfhO.
  
     0.626
SJZ36862.1
Hypothetical protein.
       0.547
SJZ89984.1
Prophage endopeptidase tail.
 
    0.545
SJZ45460.1
Type IV secretory pathway, VirB4 component.
 
  
 0.504
SJZ45050.1
Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain.
 
  
 0.476
SJZ55166.1
N-terminal domain of peptidoglycan hydrolase CwlO-containing protein.
 
  
 0.470
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.