STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ41098.1Two component transcriptional regulator, LytTR family. (252 aa)    
Predicted Functional Partners:
SJZ41103.1
Two-component system, AgrA family, sensor histidine kinase AgrC.
 
 
 0.984
SKA15354.1
GHKL domain-containing protein.
 
 
 0.743
SJZ66437.1
GHKL domain-containing protein.
 
 
 0.734
SJZ41184.1
Accessory gene regulator B.
  
  
 0.718
SKA12501.1
Histidine kinase.
 
 
 0.647
SJZ97866.1
Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.
  
     0.568
SJZ36610.1
Hypothetical protein.
 
 
 0.550
proA
Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
    
   0.534
SJZ92255.1
Putative membrane protein.
  
     0.480
SJZ41215.1
LytTr DNA-binding domain-containing protein.
       0.464
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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