STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ43426.1ABC-2 type transport system ATP-binding protein. (232 aa)    
Predicted Functional Partners:
SJZ43450.1
Hypothetical protein.
  
 0.918
SJZ43403.1
Hypothetical protein.
  
 0.895
SJZ44636.1
ABC-type multidrug transport system, ATPase and permease component.
  
  0.808
SJZ75526.1
ABC transporter.
  
  0.803
SKA12933.1
ABC transporter.
  
     0.772
SKA12921.1
AAA domain.
  
     0.769
SJZ78155.1
Cell division transport system ATP-binding protein.
  
     0.671
SKA12426.1
Putative membrane protein.
    
 0.666
SJZ91291.1
Hypothetical protein.
  
 0.653
SKA05771.1
Hypothetical protein.
  
 0.644
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.