STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ45727.1Relaxase/Mobilisation nuclease domain-containing protein. (573 aa)    
Predicted Functional Partners:
SJZ45678.1
Hypothetical protein.
 
     0.837
SJZ45630.1
Type IV secretion system protein VirD4.
 
   
 0.831
SJZ45460.1
Type IV secretory pathway, VirB4 component.
 
   
 0.809
SJZ45530.1
CHAP domain-containing protein.
 
     0.798
SJZ45709.1
Mobilisation protein (MobC).
  
    0.788
addA
DNA helicase/exodeoxyribonuclease V, subunit A; ATP-dependent DNA helicase.
  
 
 0.756
SJZ95794.1
DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...]
  
 
 0.719
SJZ42362.1
ATP-dependent DNA helicase RecQ.
  
 
 0.665
SJZ58841.1
Uncharacterized protein.
 
     0.639
SJZ45746.1
Calcineurin-like phosphoesterase superfamily protein.
       0.636
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.