STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ48229.1Protein of unknown function. (226 aa)    
Predicted Functional Partners:
SJZ48205.1
VTC domain-containing protein.
 
    0.988
SJZ48236.1
Protein of unknown function.
 
     0.926
SJZ56402.1
Cation-transporting ATPase E.
  
 
 0.678
SKA12357.1
Ca2+-transporting ATPase.
  
 
 0.678
SJZ74291.1
Two-component system, OmpR family, response regulator CiaR.
  
 
 0.633
ftsH
Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
    
 
 0.555
atpB-2
F-type H+-transporting ATPase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
    
 
 0.542
cinA
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
  
  
 0.481
SJZ74332.1
Two-component system, OmpR family, sensor histidine kinase CiaH.
  
  
 0.481
SJZ51346.1
Cd2+/Zn2+-exporting ATPase.
     
 0.452
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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