STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ49170.1Putative lysine transport system ATP-binding protein. (245 aa)    
Predicted Functional Partners:
SJZ49185.1
Putative lysine transport system permease protein.
 0.999
SJZ43328.1
Polar amino acid transport system permease protein.
 0.995
SJZ65271.1
Polar amino acid transport system substrate-binding protein.
 0.981
SJZ39570.1
Polar amino acid transport system substrate-binding protein.
 
 0.980
SJZ68741.1
Polar amino acid transport system permease protein.
 
 0.964
SKA01445.1
Polar amino acid transport system permease protein.
 0.961
SJZ68729.1
Polar amino acid transport system permease protein.
 
 0.955
SJZ81342.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.906
SJZ48683.1
ATP-binding cassette, subfamily B.
 
     
0.899
SJZ52022.1
FtsX-like permease family protein.
 
      0.899
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.