STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ55080.1Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (289 aa)    
Predicted Functional Partners:
SJZ55099.1
Rod shape-determining protein MreD.
  
 
 0.994
SJZ38637.1
Penicillin-binding protein 2B.
 
 
 0.944
SJZ91270.1
Rod shape determining protein RodA; Belongs to the SEDS family.
 
  
 0.824
SJZ40893.1
Penicillin-binding protein 2X.
 
 
 0.790
SJZ48902.1
DNA repair protein RadC; Belongs to the UPF0758 family.
 
  
 0.735
SKA11328.1
DivIVA domain-containing protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
   
 
 0.692
SJZ61692.1
Protein RodZ, contains Xre-like HTH and DUF4115 domains.
 
 
 
 0.683
SKA07530.1
Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
  
 0.624
SJZ51555.1
Penicillin-binding protein 2A.
  
 
 0.613
SJZ61886.1
Cell division initiation protein.
   
 
 0.566
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.