STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ57330.1Protein of unknown function. (380 aa)    
Predicted Functional Partners:
SJZ64530.1
Mga helix-turn-helix domain-containing protein.
  
     0.685
SJZ85890.1
Mga helix-turn-helix domain-containing protein.
  
     0.680
SJZ57312.1
Hypothetical protein.
       0.675
SJZ95955.1
Mga helix-turn-helix domain-containing protein.
  
     0.669
SKA02293.1
LPXTG-motif cell wall anchor domain-containing protein.
  
     0.602
SJZ44429.1
Mga helix-turn-helix domain-containing protein.
  
     0.599
SJZ57295.1
Hypothetical protein.
       0.582
SJZ57353.1
Hypothetical protein.
       0.493
SJZ83577.1
Uncharacterized protein YktB, UPF0637 family; Belongs to the UPF0637 family.
  
     0.456
SJZ71078.1
Mga helix-turn-helix domain-containing protein.
  
     0.444
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.