STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ59111.1Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. (473 aa)    
Predicted Functional Partners:
SJZ68901.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
   
 
  0.753
SKA07719.1
HlyD family secretion protein.
  
 
 0.486
SKA07744.1
Hypothetical protein.
  
 
 0.486
SJZ59144.1
Peptidase family M20/M25/M40.
  
    0.471
SKA01062.1
Homoserine dehydrogenase.
   
  0.471
SJZ52442.1
Sugar phosphate permease.
  
 
 0.459
SKA02892.1
Predicted transcriptional regulator containing CBS domains.
 
     0.456
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
  
 
  0.439
SJZ86462.1
MFS transporter, DHA3 family, macrolide efflux protein.
  
  
 0.436
SKA03670.1
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
   
 
 0.436
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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