STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ67483.1Propanediol dehydratase medium subunit. (219 aa)    
Predicted Functional Partners:
SJZ67444.1
Propanediol dehydratase small subunit.
 
 0.999
SJZ67497.1
Propanediol dehydratase large subunit.
 0.999
SJZ67393.1
Dehydratase medium subunit.
 
  
 0.976
SJZ67515.1
Microcompartment protein PduB.
 
  
 0.972
SJZ67420.1
Diol dehydratase reactivase alpha subunit.
 
  
 0.960
SKA11076.1
Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.853
SJZ67184.1
ATP:cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
 
  
 0.846
SJZ67167.1
Propionaldehyde dehydrogenase.
 
 
 0.825
SJZ67331.1
Ethanolamine utilization protein EutJ.
 
    0.789
SJZ59960.1
Glycerol 2-dehydrogenase (NAD+).
    
 0.759
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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