STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ68424.1Protein of unknown function. (615 aa)    
Predicted Functional Partners:
SJZ65866.1
Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.586
rpmE2
Large subunit ribosomal protein L31.
       0.541
SJZ65827.1
Type I restriction enzyme, S subunit.
  
    0.519
SJZ65880.1
Type I restriction modification DNA specificity domain-containing protein.
  
    0.519
SJZ96928.1
Hypothetical protein.
  
    0.519
SKA15163.1
Type I restriction modification DNA specificity domain-containing protein.
  
    0.519
SKA16387.1
Type I restriction enzyme M protein.
  
  
 0.439
SJZ68633.1
Fusaric acid resistance protein-like.
       0.409
SJZ83663.1
Hypothetical protein.
   
    0.405
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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