STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ68670.1Two component transcriptional regulator, LuxR family. (203 aa)    
Predicted Functional Partners:
SJZ68666.1
Signal transduction histidine kinase.
 
 0.992
SJZ71845.1
Two-component system, NarL family, sensor histidine kinase LiaS.
 
 0.967
SKA12501.1
Histidine kinase.
    
 0.844
SJZ59229.1
Energy-coupling factor transport system substrate-specific component.
    
 0.782
SJZ74332.1
Two-component system, OmpR family, sensor histidine kinase CiaH.
  
 0.767
SJZ36610.1
Hypothetical protein.
  
 0.764
SJZ62506.1
Signal transduction histidine kinase.
  
 0.764
SJZ62688.1
Hypothetical protein.
    
 0.741
SKA06802.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
  
 
 0.626
SJZ62454.1
Two-component system, OmpR family, sensor histidine kinase KdpD.
  
 0.589
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.