STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ82183.1Accessory Sec system glycosylation protein GtfA. (476 aa)    
Predicted Functional Partners:
SJZ82213.1
Accessory Sec system protein Asp3.
 
 
 
 0.984
SJZ82231.1
Accessory secretory protein Asp2.
 
 
 
 0.977
SJZ82258.1
Accessory Sec system protein Asp1.
 
   
 0.930
SJZ82299.1
Preprotein translocase subunit SecY; Belongs to the SecY/SEC61-alpha family.
 
   
 0.922
SJZ86249.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
  
 
 0.794
SJZ82163.1
Hypothetical protein.
       0.780
secA-2
Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
 
 
 
 0.770
SJZ82116.1
Hypothetical protein.
       0.727
SJZ82148.1
Hypothetical protein.
       0.727
SJZ88246.1
UDP-galactopyranose mutase.
  
 
 0.699
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.