Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ83608.1 | SJZ84545.1 | SAMN02745116_01565 | SAMN02745116_01595 | SprT-like protein; Belongs to the SprT family. | PDZ domain-containing protein. | 0.487 |
SJZ83608.1 | SJZ84620.1 | SAMN02745116_01565 | SAMN02745116_01598 | SprT-like protein; Belongs to the SprT family. | Uncharacterized protein YlbG, UPF0298 family. | 0.490 |
SJZ84386.1 | SJZ84545.1 | SAMN02745116_01589 | SAMN02745116_01595 | Lysophospholipase L1. | PDZ domain-containing protein. | 0.633 |
SJZ84528.1 | SJZ84545.1 | SAMN02745116_01594 | SAMN02745116_01595 | EcsC protein family protein. | PDZ domain-containing protein. | 0.675 |
SJZ84528.1 | SJZ84591.1 | SAMN02745116_01594 | SAMN02745116_01597 | EcsC protein family protein. | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD. | 0.674 |
SJZ84528.1 | SJZ84620.1 | SAMN02745116_01594 | SAMN02745116_01598 | EcsC protein family protein. | Uncharacterized protein YlbG, UPF0298 family. | 0.674 |
SJZ84528.1 | SJZ84652.1 | SAMN02745116_01594 | SAMN02745116_01599 | EcsC protein family protein. | Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family. | 0.610 |
SJZ84528.1 | SJZ84674.1 | SAMN02745116_01594 | SAMN02745116_01600 | EcsC protein family protein. | CAP-associated N-terminal. | 0.610 |
SJZ84528.1 | SJZ84737.1 | SAMN02745116_01594 | SAMN02745116_01601 | EcsC protein family protein. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.461 |
SJZ84528.1 | coaD | SAMN02745116_01594 | SAMN02745116_01596 | EcsC protein family protein. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.675 |
SJZ84545.1 | SJZ83608.1 | SAMN02745116_01595 | SAMN02745116_01565 | PDZ domain-containing protein. | SprT-like protein; Belongs to the SprT family. | 0.487 |
SJZ84545.1 | SJZ84386.1 | SAMN02745116_01595 | SAMN02745116_01589 | PDZ domain-containing protein. | Lysophospholipase L1. | 0.633 |
SJZ84545.1 | SJZ84528.1 | SAMN02745116_01595 | SAMN02745116_01594 | PDZ domain-containing protein. | EcsC protein family protein. | 0.675 |
SJZ84545.1 | SJZ84591.1 | SAMN02745116_01595 | SAMN02745116_01597 | PDZ domain-containing protein. | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD. | 0.855 |
SJZ84545.1 | SJZ84620.1 | SAMN02745116_01595 | SAMN02745116_01598 | PDZ domain-containing protein. | Uncharacterized protein YlbG, UPF0298 family. | 0.808 |
SJZ84545.1 | SJZ84652.1 | SAMN02745116_01595 | SAMN02745116_01599 | PDZ domain-containing protein. | Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family. | 0.739 |
SJZ84545.1 | SJZ84674.1 | SAMN02745116_01595 | SAMN02745116_01600 | PDZ domain-containing protein. | CAP-associated N-terminal. | 0.737 |
SJZ84545.1 | SJZ84737.1 | SAMN02745116_01595 | SAMN02745116_01601 | PDZ domain-containing protein. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.581 |
SJZ84545.1 | SJZ94896.1 | SAMN02745116_01595 | SAMN02745116_01936 | PDZ domain-containing protein. | Competence protein ComEA. | 0.688 |
SJZ84545.1 | coaD | SAMN02745116_01595 | SAMN02745116_01596 | PDZ domain-containing protein. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.961 |
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