STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ89333.1Putative HNHc nuclease. (228 aa)    
Predicted Functional Partners:
SJZ89295.1
Hypothetical protein.
 
     0.886
SJZ89315.1
Hypothetical protein.
 
     0.882
SJZ89388.1
Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
       0.781
SJZ89400.1
Hypothetical protein.
       0.768
SJZ89273.1
Hypothetical protein.
       0.689
SJZ89255.1
Hypothetical protein.
       0.598
SJZ89886.1
Phage tail tape measure protein, TP901 family, core region.
 
     0.541
SJZ89421.1
Hypothetical protein.
       0.453
SJZ89442.1
Hypothetical protein.
       0.453
SJZ97736.1
Hypothetical protein.
  
     0.450
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.