STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ90344.1Poly-beta-1,6 N-acetyl-D-glucosamine synthase. (432 aa)    
Predicted Functional Partners:
SJZ95826.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
 
 
 0.974
SJZ90327.1
Hypothetical protein.
 
    0.934
SJZ59229.1
Energy-coupling factor transport system substrate-specific component.
  
 
 0.887
SJZ51187.1
Chitinase.
    
 0.832
SJZ62688.1
Hypothetical protein.
  
 
 0.801
SJZ66048.1
SH3-like domain-containing protein.
  
 
 0.771
SJZ86249.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
  
 
 0.727
SJZ80145.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.612
SJZ71562.1
UDPglucose 6-dehydrogenase.
  
 
 0.589
SKA02141.1
UDPglucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.589
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.