STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ93473.1Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family. (346 aa)    
Predicted Functional Partners:
SJZ93502.1
Hypothetical protein.
       0.615
SJZ93458.1
Hypothetical protein.
       0.577
SJZ93524.1
Hypothetical protein.
       0.504
SJZ93534.1
Phage major tail protein, phi13 family.
       0.504
SJZ93548.1
Hypothetical protein.
       0.504
SJZ93563.1
Phage protein, HK97 gp10 family.
       0.504
SJZ93577.1
Phage head-tail joining protein.
       0.504
SJZ93597.1
Uncharacterized phage protein (possible DNA packaging).
       0.504
SJZ93618.1
HD domain-containing protein.
       0.430
SKA07324.1
Site-specific DNA recombinase.
  
     0.430
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.