STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ94538.1Protein kinase domain-containing protein. (505 aa)    
Predicted Functional Partners:
SJZ96161.1
Protein phosphatase.
 
 0.937
SJZ89087.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
  0.811
SJZ94596.1
Hypothetical protein.
       0.752
SJZ45814.1
Uncharacterised protein family (UPF0236).
  
 0.737
SKA06934.1
Uncharacterised protein family (UPF0236).
  
 0.737
SKA07245.1
Hypothetical protein.
  
 0.737
SKA16066.1
Uncharacterised protein family (UPF0236).
  
 0.737
smc
Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
 
 
 0.584
SJZ95826.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
  
  
 0.581
SJZ96178.1
Serine/threonine protein kinase.
 
 
0.549
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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