Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ51262.1 | SJZ79635.1 | SAMN02745116_00570 | SAMN02745116_01458 | Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.978 |
SJZ51262.1 | SJZ97964.1 | SAMN02745116_00570 | SAMN02745116_02037 | Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.400 |
SJZ72687.1 | SJZ76554.1 | SAMN02745116_01274 | SAMN02745116_01362 | NADH dehydrogenase. | Hypothetical protein. | 0.794 |
SJZ72687.1 | SJZ76563.1 | SAMN02745116_01274 | SAMN02745116_01363 | NADH dehydrogenase. | Heptaprenyl diphosphate synthase. | 0.958 |
SJZ72687.1 | SJZ79635.1 | SAMN02745116_01274 | SAMN02745116_01458 | NADH dehydrogenase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.687 |
SJZ72687.1 | SJZ97964.1 | SAMN02745116_01274 | SAMN02745116_02037 | NADH dehydrogenase. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.704 |
SJZ72687.1 | SKA00413.1 | SAMN02745116_01274 | SAMN02745116_02113 | NADH dehydrogenase. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | 0.889 |
SJZ72687.1 | SKA14200.1 | SAMN02745116_01274 | SAMN02745116_02557 | NADH dehydrogenase. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | 0.862 |
SJZ76554.1 | SJZ72687.1 | SAMN02745116_01362 | SAMN02745116_01274 | Hypothetical protein. | NADH dehydrogenase. | 0.794 |
SJZ76554.1 | SJZ76563.1 | SAMN02745116_01362 | SAMN02745116_01363 | Hypothetical protein. | Heptaprenyl diphosphate synthase. | 0.977 |
SJZ76554.1 | SJZ97964.1 | SAMN02745116_01362 | SAMN02745116_02037 | Hypothetical protein. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.784 |
SJZ76554.1 | SKA00413.1 | SAMN02745116_01362 | SAMN02745116_02113 | Hypothetical protein. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | 0.717 |
SJZ76554.1 | SKA14200.1 | SAMN02745116_01362 | SAMN02745116_02557 | Hypothetical protein. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | 0.414 |
SJZ76563.1 | SJZ72687.1 | SAMN02745116_01363 | SAMN02745116_01274 | Heptaprenyl diphosphate synthase. | NADH dehydrogenase. | 0.958 |
SJZ76563.1 | SJZ76554.1 | SAMN02745116_01363 | SAMN02745116_01362 | Heptaprenyl diphosphate synthase. | Hypothetical protein. | 0.977 |
SJZ76563.1 | SJZ97964.1 | SAMN02745116_01363 | SAMN02745116_02037 | Heptaprenyl diphosphate synthase. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.873 |
SJZ76563.1 | SKA00413.1 | SAMN02745116_01363 | SAMN02745116_02113 | Heptaprenyl diphosphate synthase. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | 0.845 |
SJZ76563.1 | SKA14200.1 | SAMN02745116_01363 | SAMN02745116_02557 | Heptaprenyl diphosphate synthase. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | 0.445 |
SJZ79635.1 | SJZ51262.1 | SAMN02745116_01458 | SAMN02745116_00570 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit. | 0.978 |
SJZ79635.1 | SJZ72687.1 | SAMN02745116_01458 | SAMN02745116_01274 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | NADH dehydrogenase. | 0.687 |
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