STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA00451.1Putative ABC transport system ATP-binding protein. (233 aa)    
Predicted Functional Partners:
SJZ52022.1
FtsX-like permease family protein.
 0.983
SKA00431.1
Putative ABC transport system permease protein.
 
 
 0.972
SJZ74870.1
FtsX-like permease family protein.
 
 0.912
SJZ59405.1
Putative ABC transport system permease protein.
 
 0.891
SJZ68708.1
Putative ABC transport system permease protein.
 
 
 0.879
SJZ57248.1
Putative ABC transport system permease protein.
 
 0.855
SJZ43328.1
Polar amino acid transport system permease protein.
 
 
 
  0.831
SJZ59441.1
Putative ABC transport system permease protein.
  
 0.811
SJZ61457.1
Putative ABC transport system permease protein.
   
 0.704
SKA03516.1
Putative ABC transport system permease protein.
   
 0.704
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.