STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA01971.1GntR family transcriptional regulator. (240 aa)    
Predicted Functional Partners:
SKA02003.1
Dipeptidase, putative.
      0.907
SJZ79635.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.783
SKA02016.1
Glycosylasparaginase precursor. Threonine peptidase. MEROPS family T02.
       0.661
SKA01934.1
Multidrug/hemolysin transport system ATP-binding protein.
       0.492
SKA01954.1
ABC-type multidrug transport system, permease component.
       0.492
SJZ97983.1
LacI family transcriptional regulator.
  
   
 0.421
SJZ73829.1
PTS system, trehalose-specific IIC component.
 
 
 0.415
SKA05869.1
Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains.
       0.412
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.