Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ59229.1 | SJZ78013.1 | SAMN02745116_00844 | SAMN02745116_01417 | Energy-coupling factor transport system substrate-specific component. | Glutamate synthase (NADPH/NADH) large chain. | 0.444 |
SJZ59229.1 | SJZ89087.1 | SAMN02745116_00844 | SAMN02745116_01747 | Energy-coupling factor transport system substrate-specific component. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.866 |
SJZ59229.1 | SKA06802.1 | SAMN02745116_00844 | SAMN02745116_02306 | Energy-coupling factor transport system substrate-specific component. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.874 |
SJZ59229.1 | rpoA | SAMN02745116_00844 | SAMN02745116_01816 | Energy-coupling factor transport system substrate-specific component. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.891 |
SJZ59229.1 | rpoB | SAMN02745116_00844 | SAMN02745116_00832 | Energy-coupling factor transport system substrate-specific component. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.862 |
SJZ59229.1 | rpoC | SAMN02745116_00844 | SAMN02745116_00833 | Energy-coupling factor transport system substrate-specific component. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.408 |
SJZ59229.1 | rpoZ | SAMN02745116_00844 | SAMN02745116_01970 | Energy-coupling factor transport system substrate-specific component. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.851 |
SJZ62688.1 | SJZ78013.1 | SAMN02745116_00979 | SAMN02745116_01417 | Hypothetical protein. | Glutamate synthase (NADPH/NADH) large chain. | 0.429 |
SJZ62688.1 | SJZ89087.1 | SAMN02745116_00979 | SAMN02745116_01747 | Hypothetical protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.844 |
SJZ62688.1 | SKA06802.1 | SAMN02745116_00979 | SAMN02745116_02306 | Hypothetical protein. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.870 |
SJZ62688.1 | rpoA | SAMN02745116_00979 | SAMN02745116_01816 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.891 |
SJZ62688.1 | rpoB | SAMN02745116_00979 | SAMN02745116_00832 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.860 |
SJZ62688.1 | rpoZ | SAMN02745116_00979 | SAMN02745116_01970 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.851 |
SJZ67102.1 | SJZ89087.1 | SAMN02745116_01120 | SAMN02745116_01747 | Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.463 |
SJZ67102.1 | SKA06802.1 | SAMN02745116_01120 | SAMN02745116_02306 | Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.787 |
SJZ78013.1 | SJZ59229.1 | SAMN02745116_01417 | SAMN02745116_00844 | Glutamate synthase (NADPH/NADH) large chain. | Energy-coupling factor transport system substrate-specific component. | 0.444 |
SJZ78013.1 | SJZ62688.1 | SAMN02745116_01417 | SAMN02745116_00979 | Glutamate synthase (NADPH/NADH) large chain. | Hypothetical protein. | 0.429 |
SJZ78013.1 | SJZ79635.1 | SAMN02745116_01417 | SAMN02745116_01458 | Glutamate synthase (NADPH/NADH) large chain. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.991 |
SJZ78013.1 | SJZ89087.1 | SAMN02745116_01417 | SAMN02745116_01747 | Glutamate synthase (NADPH/NADH) large chain. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.779 |
SJZ78013.1 | SKA06802.1 | SAMN02745116_01417 | SAMN02745116_02306 | Glutamate synthase (NADPH/NADH) large chain. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.960 |
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