STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA08572.1Zinc transport system permease protein. (277 aa)    
Predicted Functional Partners:
SKA08531.1
Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.999
SKA08559.1
Zinc transport system ATP-binding protein.
 0.999
SKA08540.1
Hypothetical protein.
       0.718
SJZ78048.1
Iron (metal) dependent repressor, DtxR family.
  
 
 0.700
mntH
Manganese transport protein; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
   
  
 0.627
SKA08588.1
DNA repair exonuclease SbcCD nuclease subunit.
 
     0.541
SKA04898.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
 
  
 0.470
SJZ43328.1
Polar amino acid transport system permease protein.
   
 
 0.468
SJZ68741.1
Polar amino acid transport system permease protein.
   
 
 0.466
SJZ63836.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
    
  0.465
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.