Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKA03670.1 | SKA08614.1 | SAMN02745116_02206 | SAMN02745116_02370 | Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol. | 3'-5' exoribonuclease. | 0.411 |
SKA08588.1 | SKA08600.1 | SAMN02745116_02368 | SAMN02745116_02369 | DNA repair exonuclease SbcCD nuclease subunit. | AAA domain-containing protein. | 0.971 |
SKA08588.1 | SKA08614.1 | SAMN02745116_02368 | SAMN02745116_02370 | DNA repair exonuclease SbcCD nuclease subunit. | 3'-5' exoribonuclease. | 0.580 |
SKA08600.1 | SKA08588.1 | SAMN02745116_02369 | SAMN02745116_02368 | AAA domain-containing protein. | DNA repair exonuclease SbcCD nuclease subunit. | 0.971 |
SKA08600.1 | SKA08614.1 | SAMN02745116_02369 | SAMN02745116_02370 | AAA domain-containing protein. | 3'-5' exoribonuclease. | 0.597 |
SKA08614.1 | SKA03670.1 | SAMN02745116_02370 | SAMN02745116_02206 | 3'-5' exoribonuclease. | Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol. | 0.411 |
SKA08614.1 | SKA08588.1 | SAMN02745116_02370 | SAMN02745116_02368 | 3'-5' exoribonuclease. | DNA repair exonuclease SbcCD nuclease subunit. | 0.580 |
SKA08614.1 | SKA08600.1 | SAMN02745116_02370 | SAMN02745116_02369 | 3'-5' exoribonuclease. | AAA domain-containing protein. | 0.597 |
SKA08614.1 | rny | SAMN02745116_02370 | SAMN02745116_01708 | 3'-5' exoribonuclease. | Ribonucrease Y; Endoribonuclease that initiates mRNA decay. | 0.408 |
SKA08614.1 | tmk | SAMN02745116_02370 | SAMN02745116_01728 | 3'-5' exoribonuclease. | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.444 |
rny | SKA08614.1 | SAMN02745116_01708 | SAMN02745116_02370 | Ribonucrease Y; Endoribonuclease that initiates mRNA decay. | 3'-5' exoribonuclease. | 0.408 |
tmk | SKA08614.1 | SAMN02745116_01728 | SAMN02745116_02370 | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 3'-5' exoribonuclease. | 0.444 |