STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA09220.1Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase. (1007 aa)    
Predicted Functional Partners:
SJZ88246.1
UDP-galactopyranose mutase.
 
  
 0.747
SKA09236.1
Glycosyl transferase family 2.
  
  
 0.723
SKA09210.1
Polysaccharide pyruvyl transferase.
     
 0.613
SKA09193.1
Acetyltransferase (isoleucine patch superfamily).
       0.602
SJZ86249.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
  
 
 0.575
SJZ82258.1
Accessory Sec system protein Asp1.
 
 
 0.517
SKA01195.1
5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family.
  
    0.517
SKA09256.1
CDP-glycerol glycerophosphotransferase.
       0.513
SKA05125.1
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.496
SJZ92339.1
General stress protein 26.
   
    0.459
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.