STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA10189.1Oligogalacturonide transport system substrate-binding protein. (441 aa)    
Predicted Functional Partners:
SKA10248.1
Oligogalacturonide transport system permease protein.
 0.947
SJZ44850.1
Multiple sugar transport system permease protein.
 
 0.933
SJZ44869.1
Multiple sugar transport system permease protein.
  
 0.930
SKA10227.1
Oligogalacturonide transport system permease protein.
 
 0.930
SJZ63863.1
Putative aldouronate transport system permease protein.
  
 0.863
SJZ63836.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.834
SJZ95542.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.834
SKA05192.1
Putative aldouronate transport system permease protein.
  
 0.802
SJZ98041.1
Multiple sugar transport system permease protein.
  
 0.798
SJZ98019.1
Multiple sugar transport system permease protein.
 
 0.786
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.