STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA10312.1ATP-binding cassette, subfamily B, multidrug efflux pump. (583 aa)    
Predicted Functional Partners:
SKA10318.1
ATP-binding cassette, subfamily B, multidrug efflux pump.
 
0.987
SJZ79179.1
ATP-binding cassette, subfamily B.
 
0.946
SKA01432.1
Polar amino acid transport system ATP-binding protein.
 
     
0.899
pstB-2
Phosphate transport system ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.897
SJZ63950.1
ATP-binding cassette, subfamily B.
 
 
0.810
SJZ48704.1
ABC-type multidrug transport system, ATPase and permease component.
 
 
0.803
SJZ81469.1
ATP-binding cassette, subfamily B.
 
 
0.803
SJZ81476.1
ATP-binding cassette, subfamily B.
 
 
0.801
SJZ63940.1
ATP-binding cassette, subfamily B.
 
 
0.800
phnC
Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
     
0.792
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.