STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA12501.1Histidine kinase. (571 aa)    
Predicted Functional Partners:
SKA12489.1
Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains.
 
 
 0.986
SJZ36610.1
Hypothetical protein.
   
 0.928
SJZ62506.1
Signal transduction histidine kinase.
   
 0.928
SJZ74332.1
Two-component system, OmpR family, sensor histidine kinase CiaH.
   
 0.928
SKA05715.1
PocR sensory domain-containing protein.
 
  
  0.928
SJZ36140.1
AraC-type DNA-binding protein.
 
 
 0.912
SJZ61873.1
Helix-turn-helix domain-containing protein.
 
  
  0.904
SJZ59036.1
Helix-turn-helix domain-containing protein.
 
 
 0.891
SJZ67565.1
Ligand-binding sensor domain-containing protein.
  
  0.884
SJZ68670.1
Two component transcriptional regulator, LuxR family.
    
 0.844
Your Current Organism:
Pilibacter termitis
NCBI taxonomy Id: 263852
Other names: CCUG 49613, P. termitis, Pilibacter termitis Higashiguchi et al. 2006, gut bacterium 1 of Coptotermes formosanus, strain TI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.