STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ60608.1Hypothetical protein. (184 aa)    
Predicted Functional Partners:
AAZ60607.1
Transport-associated protein.
 
     0.583
AAZ64327.1
Hypothetical protein.
  
     0.562
AAZ63941.1
Transport-associated protein.
 
     0.478
AAZ63727.1
Transport-associated protein.
 
     0.462
AAZ63070.1
Porin, Gram-negative type.
  
     0.455
AAZ64666.1
Oligopeptide transporter OPT superfamily.
  
     0.431
AAZ61112.1
Conserved hypothetical protein.
  
     0.410
AAZ61116.1
Conserved hypothetical protein.
  
     0.408
Your Current Organism:
Cupriavidus pinatubonensis
NCBI taxonomy Id: 264198
Other names: C. pinatubonensis JMP134, Cupriavidus necator JMP134, Cupriavidus pinatubonensis JMP134, Ralstonia eutropha JMP134, Ralstonia eutropha str. JMP134, Ralstonia eutropha strain JMP134, Ralstonia sp. JMP134, Wautersia eutropha JMP134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.