STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ61255.1Protein of unknown function DUF6, transmembrane. (341 aa)    
Predicted Functional Partners:
AAZ61256.1
Succinyldiaminopimelate aminotransferase apoenzyme.
 
   
 0.648
AAZ64939.1
Probable integrase/recombinase protein.
  
   
 0.638
AAZ62695.1
Transporter, CPA2 family; TC 2.A.37.
 
  
 0.579
dapD
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.
  
    0.506
AAZ62571.1
Conserved hypothetical protein.
  
    0.499
AAZ59775.1
Putative integral membrane protein.
  
    0.478
AAZ61519.1
Conserved hypothetical transmembrane protein.
  
     0.454
AAZ60235.1
Protein of unknown function DUF1228; Major facilitator superfamily MFS_1.
 
  
 0.452
AAZ60121.1
Putative lipopolysaccharide biosynthesis protein.
 
  
 0.448
AAZ61479.1
DNA helicase/exodeoxyribonuclease V, subunit B.
 
     0.444
Your Current Organism:
Cupriavidus pinatubonensis
NCBI taxonomy Id: 264198
Other names: C. pinatubonensis JMP134, Cupriavidus necator JMP134, Cupriavidus pinatubonensis JMP134, Ralstonia eutropha JMP134, Ralstonia eutropha str. JMP134, Ralstonia eutropha strain JMP134, Ralstonia sp. JMP134, Wautersia eutropha JMP134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.