Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAZ61792.1 | AAZ62812.1 | Reut_A2430 | Reut_A3454 | Fatty acid desaturase. | Plasmid stabilization protein. | 0.401 |
AAZ62811.1 | AAZ62812.1 | Reut_A3453 | Reut_A3454 | HAD-superfamily hydrolase subfamily IA, variant 3. | Plasmid stabilization protein. | 0.533 |
AAZ62811.1 | vapC | Reut_A3453 | Reut_A3455 | HAD-superfamily hydrolase subfamily IA, variant 3. | PilT protein, N-terminal; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.533 |
AAZ62812.1 | AAZ61792.1 | Reut_A3454 | Reut_A2430 | Plasmid stabilization protein. | Fatty acid desaturase. | 0.401 |
AAZ62812.1 | AAZ62811.1 | Reut_A3454 | Reut_A3453 | Plasmid stabilization protein. | HAD-superfamily hydrolase subfamily IA, variant 3. | 0.533 |
AAZ62812.1 | AAZ64968.1 | Reut_A3454 | Reut_B5623 | Plasmid stabilization protein. | Anti-sigma-28 factor, FlgM. | 0.412 |
AAZ62812.1 | vapC | Reut_A3454 | Reut_A3455 | Plasmid stabilization protein. | PilT protein, N-terminal; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.988 |
AAZ64968.1 | AAZ62812.1 | Reut_B5623 | Reut_A3454 | Anti-sigma-28 factor, FlgM. | Plasmid stabilization protein. | 0.412 |
vapC | AAZ62811.1 | Reut_A3455 | Reut_A3453 | PilT protein, N-terminal; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | HAD-superfamily hydrolase subfamily IA, variant 3. | 0.533 |
vapC | AAZ62812.1 | Reut_A3455 | Reut_A3454 | PilT protein, N-terminal; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Plasmid stabilization protein. | 0.988 |