STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ63880.1Amidohydrolase. (488 aa)    
Predicted Functional Partners:
AAZ63879.1
Protein of unknown function DUF81.
 
     0.845
AAZ63881.1
Xanthine/uracil/vitamin C permease.
 
  
 0.838
AAZ63884.1
Amidase, hydantoinase/carbamoylase.
 
  
 0.525
AAZ63885.1
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
 
  
 0.483
AAZ63883.1
Diaminopropionate ammonia-lyase.
  
  
 0.478
AAZ63882.1
Transcriptional regulator, RpiR family.
       0.465
AAZ62073.1
Formimidoylglutamate deiminase.
  
     0.422
Your Current Organism:
Cupriavidus pinatubonensis
NCBI taxonomy Id: 264198
Other names: C. pinatubonensis JMP134, Cupriavidus necator JMP134, Cupriavidus pinatubonensis JMP134, Ralstonia eutropha JMP134, Ralstonia eutropha str. JMP134, Ralstonia eutropha strain JMP134, Ralstonia sp. JMP134, Wautersia eutropha JMP134
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