STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ64140.1Transcriptional regulator, GntR family. (240 aa)    
Predicted Functional Partners:
AAZ60631.1
Transcriptional regulator, GntR family.
 
  
 0.793
AAZ63307.1
Transcriptional regulator, GntR family.
  
     0.770
AAZ64029.1
Transcriptional regulator, GntR family.
  
     0.769
AAZ61809.1
Transcriptional regulator, GntR family.
  
     0.763
AAZ60678.1
Transcriptional regulator, GntR family.
 
  
 0.757
AAZ64794.1
Transcriptional regulator, GntR family.
 
  
 0.710
AAZ64143.1
Phthalate 4,5-dioxygenase.
     
 0.662
AAZ64142.1
4-oxalomesaconate hydratase.
  
    0.660
AAZ64141.1
Endoribonuclease L-PSP.
       0.657
AAZ64144.1
Uncharacterized protein UPF0065.
       0.555
Your Current Organism:
Cupriavidus pinatubonensis
NCBI taxonomy Id: 264198
Other names: C. pinatubonensis JMP134, Cupriavidus necator JMP134, Cupriavidus pinatubonensis JMP134, Ralstonia eutropha JMP134, Ralstonia eutropha str. JMP134, Ralstonia eutropha strain JMP134, Ralstonia sp. JMP134, Wautersia eutropha JMP134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.