STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ64321.1ATP-binding region, ATPase-like:Stage II sporulation E. (348 aa)    
Predicted Functional Partners:
AAZ64318.1
Sulfate transporter/antisigma-factor antagonist STAS.
 
 
 0.999
AAZ64319.1
Sulfate transporter/antisigma-factor antagonist STAS.
 
 
 0.999
AAZ64320.1
ATP-binding region, ATPase-like protein.
 
 
0.976
AAZ63425.1
PAS/PAC sensor hybrid histidine kinase.
  
  
 0.974
AAZ64391.1
PAS.
  
  
 0.974
AAZ64691.1
PAS.
  
  
 0.974
AAZ60180.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
  
 
 0.962
AAZ62027.1
PAS:GGDEF.
  
 
 0.962
AAZ64323.1
PAS/PAC sensor hybrid histidine kinase.
 
  
 0.960
fliA
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.
  
 
 0.953
Your Current Organism:
Cupriavidus pinatubonensis
NCBI taxonomy Id: 264198
Other names: C. pinatubonensis JMP134, Cupriavidus necator JMP134, Cupriavidus pinatubonensis JMP134, Ralstonia eutropha JMP134, Ralstonia eutropha str. JMP134, Ralstonia eutropha strain JMP134, Ralstonia sp. JMP134, Wautersia eutropha JMP134
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