STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbpD1Cell wall protein precursor, similar to choline binding protein. (279 aa)    
Predicted Functional Partners:
stu1602
Conserved hypothetical protein.
  
     0.751
murN
Peptidoglycan branched peptide synthesis protein, alanine adding enzyme.
  
     0.719
stu0574
Conserved hypothetical protein.
  
     0.710
stu0699
Endolysin, putative.
  
   
 0.704
stu1321
Conserved hypothetical protein, truncated; Truncated.
  
     0.683
dnaB
Chromosome replication initiation / membrane attachment protein DnaB.
  
     0.641
rgpF
Polysaccharide biosynthesis protein.
 
     0.625
stu0009
Conserved hypothetical protein.
  
     0.620
rexB
ATP-dependent exonuclease, subunit B; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' -> 3' nuclease activity; Belongs to the helicase family. AddB/RexB type 2 subfamily.
  
     0.571
stu1044
Positive transcriptional regulator MutR family.
  
     0.568
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.