STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mur3Peptidoglycan hydrolase. (194 aa)    
Predicted Functional Partners:
dacB
D-alanyl-D-alanine-carboxypeptidase.
     
 0.808
stu0115
Phosphoglycerate mutase, truncated; Truncated.
       0.782
mur1
Peptidoglycan hydrolase.
  
     0.766
cse
Cell segregation protein.
      
 0.737
mur2
Peptidoglycan hydrolase.
  
     0.632
divIC
Cell-cycle protein, MesJ/Ycf62 family, putative.
      
 0.580
cinA
Competence/damage inducible protein; Belongs to the CinA family.
      
 0.558
stu1750
Conserved hypothetical, predicted membrane protein (TMS4).
  
     0.530
stu0316
Conserved hypothetical protein.
  
     0.522
stu0114
Phosphoglycerate mutase, truncated; Truncated.
       0.520
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.