Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
stu0168Conserved hypothetical protein. (472 aa)    
Predicted Functional Partners:
stu0164
ABC transporter ATP binding protein.
 
 0.998
nifS1
Aminotransferase (class V), putative; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.995
nifU
Conserved hypothetical protein, NifU family protein.
 
  
 0.990
stu0165
Conserved hypothetical protein.
 
  
0.956
mecA
Negative regulator of genetic competence, putative; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis.
       0.570
rgpG
Exopolysaccharide biosynthesis protein, glycosyltransferase.
       0.570
stu1487
Conserved hypothetical protein.
 
   
 0.465
stu1603
Conserved hypothetical protein.
 
   
 0.433
stu0170
Oligopeptide ABC uptake transporter substrate binding protein, truncated; Truncated.
       0.412
stu0169
Oligopeptide ABC uptake transporter substrate binding protein, truncated; Truncated.
       0.410
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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