Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
stu0182Positive transcriptional regulator MutR family. (238 aa)    
Predicted Functional Partners:
stu1511
Positive transcriptional regulator MutR family.
  
  
  0.975
stu1947
Positive transcriptional regulator MutR family.
  
  
 
0.926
eep
Conserved hypothetical, predicted membrane protein (TMS5).
     
 0.818
amiE
Oligopeptide ABC uptake transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
      
 0.697
stu0184
Conserved hypothetical, predicted membrane protein (TMS10).
 
   
 0.616
stu0183
Conserved hypothetical protein, putative protein kinase.
 
 
   0.578
stu0294
drug:H+ antiporter-3 (DHA3) family protein.
  
     0.558
plcR
Transcriptional regulator.
      
 0.538
stu1602
Conserved hypothetical protein.
  
     0.509
labT
Bacteriocin exporter, putative.
 
   
 0.488
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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