STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbp2APenicillin-binding protein 2A. (775 aa)    
Predicted Functional Partners:
pbp2X
Penicillin binding protein 2X.
 
 
 0.998
pbp2B
Penicillin-binding protein 2B.
 
 0.997
rodA
Cell division protein; Belongs to the SEDS family.
 
 
 
 0.969
ftsW
Cell division protein; Belongs to the SEDS family.
 
 
 
 0.968
pbp1A
Penicillin-binding protein 1A.
  
  
0.946
pbp1B
Penicillin-binding protein 1B.
  
  
0.946
stu0078
D-alanyl-D-alanine carboxypeptidase, truncated; Truncated.
  
 
 0.928
dacA1
D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein; Belongs to the peptidase S11 family.
  
 
 0.928
mreC
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
 
 0.925
gpsB
Conserved hypothetical protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
   
 
 0.919
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.