Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
stu0299Succinyl-diaminopimelic descuccinlyasadipeptidase, truncated; Truncated. (121 aa)    
Predicted Functional Partners:
stu0298
Succinyl-diaminopimelic descuccinlyasadipeptidase, truncated; Truncated.
     0.989
stu0300
Succinyl-diaminopimelic descuccinlyasadipeptidase, truncated; Truncated.
     0.987
metN
Polar amino acid ABC uptake transporter ATP binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
     
 0.598
stu0302
ABC transporter membrane-spanning protein.
       0.568
stu0297
ABC transporter substrate binding protein; Belongs to the nlpA lipoprotein family.
       0.484
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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