Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| bioY1 | bioY2 | stu0674 | stu1308 | Biotin synthase. | Biotin synthase. | 0.913 |
| bioY1 | ecfA1 | stu0674 | stu2009 | Biotin synthase. | ABC transporter ATP binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (By similarity). Expression of the complex plus RibU in de-energized E.coli allows riboflavin uptake. | 0.935 |
| bioY1 | ecfA2 | stu0674 | stu2008 | Biotin synthase. | ABC transporter ATP binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (By similarity). Expression of the complex plus RibU in de-energized E.coli allows riboflavin uptake. | 0.939 |
| bioY1 | ecfT | stu0674 | stu2007 | Biotin synthase. | ABC transporter membrane-spanning protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. Expression of the complex plus RibU in de- energized E.coli allows riboflavin uptake. | 0.956 |
| bioY1 | stu0290 | stu0674 | stu0290 | Biotin synthase. | ABC transporter ATP-binding protein. | 0.656 |
| bioY1 | stu0311 | stu0674 | stu0311 | Biotin synthase. | ABC transporter membrane-spanning protein, truncated; Truncated. | 0.921 |
| bioY2 | bioY1 | stu1308 | stu0674 | Biotin synthase. | Biotin synthase. | 0.913 |
| bioY2 | ecfA1 | stu1308 | stu2009 | Biotin synthase. | ABC transporter ATP binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (By similarity). Expression of the complex plus RibU in de-energized E.coli allows riboflavin uptake. | 0.934 |
| bioY2 | ecfA2 | stu1308 | stu2008 | Biotin synthase. | ABC transporter ATP binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (By similarity). Expression of the complex plus RibU in de-energized E.coli allows riboflavin uptake. | 0.937 |
| bioY2 | ecfT | stu1308 | stu2007 | Biotin synthase. | ABC transporter membrane-spanning protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. Expression of the complex plus RibU in de- energized E.coli allows riboflavin uptake. | 0.951 |
| bioY2 | stu0290 | stu1308 | stu0290 | Biotin synthase. | ABC transporter ATP-binding protein. | 0.598 |
| bioY2 | stu0311 | stu1308 | stu0311 | Biotin synthase. | ABC transporter membrane-spanning protein, truncated; Truncated. | 0.921 |
| ecfA1 | bioY1 | stu2009 | stu0674 | ABC transporter ATP binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (By similarity). Expression of the complex plus RibU in de-energized E.coli allows riboflavin uptake. | Biotin synthase. | 0.935 |
| ecfA1 | bioY2 | stu2009 | stu1308 | ABC transporter ATP binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (By similarity). Expression of the complex plus RibU in de-energized E.coli allows riboflavin uptake. | Biotin synthase. | 0.934 |
| ecfA1 | ecfA2 | stu2009 | stu2008 | ABC transporter ATP binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (By similarity). Expression of the complex plus RibU in de-energized E.coli allows riboflavin uptake. | ABC transporter ATP binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (By similarity). Expression of the complex plus RibU in de-energized E.coli allows riboflavin uptake. | 0.990 |
| ecfA1 | ecfT | stu2009 | stu2007 | ABC transporter ATP binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (By similarity). Expression of the complex plus RibU in de-energized E.coli allows riboflavin uptake. | ABC transporter membrane-spanning protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. Expression of the complex plus RibU in de- energized E.coli allows riboflavin uptake. | 0.998 |
| ecfA1 | stu0306 | stu2009 | stu0306 | ABC transporter ATP binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (By similarity). Expression of the complex plus RibU in de-energized E.coli allows riboflavin uptake. | Conserved hypothetical protein, truncated; Truncated. | 0.438 |
| ecfA1 | stu0307 | stu2009 | stu0307 | ABC transporter ATP binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (By similarity). Expression of the complex plus RibU in de-energized E.coli allows riboflavin uptake. | Conserved hypothetical protein, truncated; Truncated. | 0.438 |
| ecfA1 | stu0311 | stu2009 | stu0311 | ABC transporter ATP binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (By similarity). Expression of the complex plus RibU in de-energized E.coli allows riboflavin uptake. | ABC transporter membrane-spanning protein, truncated; Truncated. | 0.963 |
| ecfA2 | bioY1 | stu2008 | stu0674 | ABC transporter ATP binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (By similarity). Expression of the complex plus RibU in de-energized E.coli allows riboflavin uptake. | Biotin synthase. | 0.939 |
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