Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
stu0367Conserved hypothetical protein. (208 aa)    
Predicted Functional Partners:
hpf
Ribosomal subunit interface protein, ribosomal protein S30AE family; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
     
 0.865
cysM1
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
   0.775
comFA
Late competence protein required for DNA uptake.
     
 0.758
comFC
Late competence protein.
       0.737
stu1000
rRNA methyltransferase, putative.
  
  
 0.688
stu1142
Predicted membrane protein of the putative permease (PerM) family.
     
 0.637
stu1608
ABC transporter membrane-spanning protein.
      
 0.635
suhB
Inositol monophosphatase family protein.
      
 0.630
stu1249
Conserved hypothetical protein.
   
    0.470
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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